Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf20Q5DTM8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf20Q5DTM8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf20Q5DTM8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf20Q5DTM8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf20Q5DTM8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf20Q5DTM8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf20Q5DTM8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf20Q5DTM8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Rnf20Q5DTM8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf20Q5DTM8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf20Q5DTM8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms