Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf180Q3U827 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.13■□□□□ 0.49
Rnf180Q3U827 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Gm27243-201ENSMUST00000183964 521 ntBASIC18.13■□□□□ 0.49
Rnf180Q3U827 Gm17794-201ENSMUST00000220252 955 ntBASIC18.13■□□□□ 0.49
Rnf180Q3U827 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.13■□□□□ 0.49
Rnf180Q3U827 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf180Q3U827 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.12■□□□□ 0.49
Rnf180Q3U827 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.12■□□□□ 0.49
Rnf180Q3U827 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Gm18056-201ENSMUST00000207670 568 ntBASIC18.12■□□□□ 0.49
Rnf180Q3U827 Gm18061-201ENSMUST00000208350 562 ntBASIC18.12■□□□□ 0.49
Rnf180Q3U827 Gm18063-201ENSMUST00000208529 568 ntBASIC18.12■□□□□ 0.49
Rnf180Q3U827 Gm18052-201ENSMUST00000208750 559 ntBASIC18.12■□□□□ 0.49
Rnf180Q3U827 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC18.12■□□□□ 0.49
Rnf180Q3U827 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf180Q3U827 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Mir692-1-201ENSMUST00000102263 109 ntBASIC18.11■□□□□ 0.49
Rnf180Q3U827 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC18.11■□□□□ 0.49
Rnf180Q3U827 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rnf180Q3U827 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf180Q3U827 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf180Q3U827 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.11■□□□□ 0.49
Rnf180Q3U827 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Rnf180Q3U827 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.11■□□□□ 0.49
Rnf180Q3U827 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf180Q3U827 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Gm38241-201ENSMUST00000192641 898 ntBASIC18.1■□□□□ 0.49
Rnf180Q3U827 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf180Q3U827 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf180Q3U827 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf180Q3U827 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.09■□□□□ 0.49
Rnf180Q3U827 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rnf180Q3U827 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf180Q3U827 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Rnf180Q3U827 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rnf180Q3U827 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Rnf180Q3U827 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.09■□□□□ 0.49
Rnf180Q3U827 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.09■□□□□ 0.49
Rnf180Q3U827 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf180Q3U827 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf180Q3U827 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms