Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col19a1Q0VF58 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Gm12091-201ENSMUST00000146791 830 ntBASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col19a1Q0VF58 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Haglr-201ENSMUST00000100000 2085 ntBASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col19a1Q0VF58 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Gm16026-204ENSMUST00000162652 683 ntBASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.48■□□□□ 0.23
Col19a1Q0VF58 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col19a1Q0VF58 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.47■□□□□ 0.23
Col19a1Q0VF58 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms