Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Gm13186-201ENSMUST00000118031 316 ntBASIC13.8□□□□□ -0.2
Rab42Q0PD08 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rab42Q0PD08 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rab42Q0PD08 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Rab42Q0PD08 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.79□□□□□ -0.2
Rab42Q0PD08 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Gm10252-201ENSMUST00000209541 832 ntBASIC13.79□□□□□ -0.2
Rab42Q0PD08 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rab42Q0PD08 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.78□□□□□ -0.2
Rab42Q0PD08 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.78□□□□□ -0.2
Rab42Q0PD08 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.78□□□□□ -0.2
Rab42Q0PD08 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.78□□□□□ -0.2
Rab42Q0PD08 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rab42Q0PD08 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rab42Q0PD08 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rab42Q0PD08 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rab42Q0PD08 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rab42Q0PD08 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rab42Q0PD08 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab42Q0PD08 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rab42Q0PD08 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms