Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Emx1Q04742 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Emx1Q04742 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Emx1Q04742 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Emx1Q04742 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Emx1Q04742 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Emx1Q04742 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Emx1Q04742 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Emx1Q04742 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Gm28033-201ENSMUST00000184224 96 ntBASIC14.54□□□□□ -0.08
Emx1Q04742 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Emx1Q04742 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Emx1Q04742 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.54□□□□□ -0.08
Emx1Q04742 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Emx1Q04742 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Emx1Q04742 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Emx1Q04742 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.53□□□□□ -0.08
Emx1Q04742 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Emx1Q04742 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Emx1Q04742 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Emx1Q04742 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.53□□□□□ -0.08
Emx1Q04742 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.53□□□□□ -0.08
Emx1Q04742 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Emx1Q04742 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Emx1Q04742 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.53□□□□□ -0.08
Emx1Q04742 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Emx1Q04742 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Emx1Q04742 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Emx1Q04742 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
Emx1Q04742 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Emx1Q04742 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Emx1Q04742 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.52□□□□□ -0.08
Emx1Q04742 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Emx1Q04742 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.52□□□□□ -0.08
Emx1Q04742 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Emx1Q04742 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Emx1Q04742 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Emx1Q04742 Gm11950-201ENSMUST00000121615 838 ntBASIC14.52□□□□□ -0.09
Emx1Q04742 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Emx1Q04742 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.52□□□□□ -0.09
Emx1Q04742 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Emx1Q04742 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Emx1Q04742 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Emx1Q04742 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Emx1Q04742 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Emx1Q04742 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Emx1Q04742 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Emx1Q04742 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Emx1Q04742 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Emx1Q04742 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.52□□□□□ -0.09
Emx1Q04742 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Emx1Q04742 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms