Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.3■□□□□ 0.2
NcanP55066 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.3■□□□□ 0.2
NcanP55066 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Gm18737-201ENSMUST00000173594 937 ntBASIC16.3■□□□□ 0.2
NcanP55066 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Gm18049-201ENSMUST00000208909 581 ntBASIC16.3■□□□□ 0.2
NcanP55066 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.3■□□□□ 0.2
NcanP55066 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NcanP55066 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NcanP55066 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NcanP55066 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.29■□□□□ 0.2
NcanP55066 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NcanP55066 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.29■□□□□ 0.2
NcanP55066 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.29■□□□□ 0.2
NcanP55066 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.29■□□□□ 0.2
NcanP55066 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.29■□□□□ 0.2
NcanP55066 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Gm16026-204ENSMUST00000162652 683 ntBASIC16.29■□□□□ 0.2
NcanP55066 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.29■□□□□ 0.2
NcanP55066 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NcanP55066 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NcanP55066 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.29■□□□□ 0.2
NcanP55066 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NcanP55066 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NcanP55066 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NcanP55066 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.28■□□□□ 0.2
NcanP55066 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NcanP55066 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NcanP55066 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.28■□□□□ 0.2
NcanP55066 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NcanP55066 Gm24694-201ENSMUST00000180054 110 ntBASIC16.28■□□□□ 0.2
NcanP55066 Gm27663-201ENSMUST00000184839 110 ntBASIC16.28■□□□□ 0.2
NcanP55066 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Gm29667-201ENSMUST00000190817 490 ntBASIC16.28■□□□□ 0.2
NcanP55066 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.28■□□□□ 0.2
NcanP55066 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.28■□□□□ 0.2
NcanP55066 Gm45841-201ENSMUST00000207700 164 ntBASIC16.28■□□□□ 0.2
NcanP55066 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.28■□□□□ 0.2
NcanP55066 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NcanP55066 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NcanP55066 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NcanP55066 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NcanP55066 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NcanP55066 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NcanP55066 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NcanP55066 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NcanP55066 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.27■□□□□ 0.2
NcanP55066 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.27■□□□□ 0.2
NcanP55066 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NcanP55066 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NcanP55066 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NcanP55066 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
NcanP55066 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.27■□□□□ 0.19
NcanP55066 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NcanP55066 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.27■□□□□ 0.19
NcanP55066 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms