Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nub1P54729 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.75■□□□□ 0.27
Nub1P54729 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nub1P54729 Gm6296-201ENSMUST00000222599 943 ntBASIC16.75■□□□□ 0.27
Nub1P54729 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nub1P54729 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nub1P54729 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Nub1P54729 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nub1P54729 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nub1P54729 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nub1P54729 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nub1P54729 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Nub1P54729 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nub1P54729 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nub1P54729 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.74■□□□□ 0.27
Nub1P54729 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.74■□□□□ 0.27
Nub1P54729 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.74■□□□□ 0.27
Nub1P54729 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Nub1P54729 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nub1P54729 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nub1P54729 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.74■□□□□ 0.27
Nub1P54729 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nub1P54729 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.73■□□□□ 0.27
Nub1P54729 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nub1P54729 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.73■□□□□ 0.27
Nub1P54729 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.73■□□□□ 0.27
Nub1P54729 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.73■□□□□ 0.27
Nub1P54729 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.73■□□□□ 0.27
Nub1P54729 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nub1P54729 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.73■□□□□ 0.27
Nub1P54729 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Nub1P54729 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nub1P54729 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.72■□□□□ 0.27
Nub1P54729 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.72■□□□□ 0.27
Nub1P54729 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nub1P54729 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nub1P54729 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.72■□□□□ 0.27
Nub1P54729 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Nub1P54729 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.71■□□□□ 0.27
Nub1P54729 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.71■□□□□ 0.27
Nub1P54729 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nub1P54729 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.71■□□□□ 0.27
Nub1P54729 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.71■□□□□ 0.27
Nub1P54729 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.71■□□□□ 0.27
Nub1P54729 Gm11780-201ENSMUST00000136880 516 ntBASIC16.71■□□□□ 0.27
Nub1P54729 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.71■□□□□ 0.27
Nub1P54729 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 Gm4535-201ENSMUST00000182274 558 ntBASIC16.71■□□□□ 0.27
Nub1P54729 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nub1P54729 Gm10355-201ENSMUST00000097146 517 ntBASIC16.71■□□□□ 0.27
Nub1P54729 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.71■□□□□ 0.27
Nub1P54729 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Nub1P54729 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms