Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.49■□□□□ 0.39
Sdc2P43407 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Sdc2P43407 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Sdc2P43407 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.48■□□□□ 0.39
Sdc2P43407 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.48■□□□□ 0.39
Sdc2P43407 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sdc2P43407 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.48■□□□□ 0.39
Sdc2P43407 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sdc2P43407 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sdc2P43407 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sdc2P43407 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc2P43407 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sdc2P43407 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Sdc2P43407 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.47■□□□□ 0.39
Sdc2P43407 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Sdc2P43407 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sdc2P43407 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.47■□□□□ 0.39
Sdc2P43407 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc2P43407 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sdc2P43407 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sdc2P43407 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sdc2P43407 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.46■□□□□ 0.39
Sdc2P43407 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.46■□□□□ 0.39
Sdc2P43407 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Sdc2P43407 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sdc2P43407 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc2P43407 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Sdc2P43407 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Sdc2P43407 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sdc2P43407 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.45■□□□□ 0.38
Sdc2P43407 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sdc2P43407 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sdc2P43407 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.45■□□□□ 0.38
Sdc2P43407 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sdc2P43407 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc2P43407 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc2P43407 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sdc2P43407 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sdc2P43407 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms