Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.34□□□□□ -0.43
Rom1P32958 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.34□□□□□ -0.43
Rom1P32958 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rom1P32958 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rom1P32958 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rom1P32958 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Rom1P32958 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.34□□□□□ -0.43
Rom1P32958 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Rom1P32958 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rom1P32958 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rom1P32958 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.33□□□□□ -0.44
Rom1P32958 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rom1P32958 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rom1P32958 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rom1P32958 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.33□□□□□ -0.44
Rom1P32958 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.33□□□□□ -0.44
Rom1P32958 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.33□□□□□ -0.44
Rom1P32958 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rom1P32958 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.32□□□□□ -0.44
Rom1P32958 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rom1P32958 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Rom1P32958 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rom1P32958 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rom1P32958 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Mir1199-201ENSMUST00000117015 119 ntBASIC12.32□□□□□ -0.44
Rom1P32958 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rom1P32958 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Gm3375-201ENSMUST00000203929 796 ntBASIC12.32□□□□□ -0.44
Rom1P32958 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rom1P32958 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rom1P32958 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rom1P32958 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.31□□□□□ -0.44
Rom1P32958 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.31□□□□□ -0.44
Rom1P32958 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rom1P32958 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.31□□□□□ -0.44
Rom1P32958 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rom1P32958 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rom1P32958 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.31□□□□□ -0.44
Rom1P32958 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.31□□□□□ -0.44
Rom1P32958 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.31□□□□□ -0.44
Rom1P32958 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rom1P32958 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rom1P32958 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rom1P32958 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rom1P32958 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms