Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nedd8P29595 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.45□□□□□ -0.1
Nedd8P29595 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nedd8P29595 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nedd8P29595 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.44□□□□□ -0.1
Nedd8P29595 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nedd8P29595 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Gm13158-201ENSMUST00000122007 736 ntBASIC14.44□□□□□ -0.1
Nedd8P29595 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.44□□□□□ -0.1
Nedd8P29595 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.44□□□□□ -0.1
Nedd8P29595 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nedd8P29595 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nedd8P29595 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nedd8P29595 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nedd8P29595 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Nedd8P29595 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nedd8P29595 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nedd8P29595 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.43□□□□□ -0.1
Nedd8P29595 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nedd8P29595 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Nedd8P29595 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nedd8P29595 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Nedd8P29595 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Nedd8P29595 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nedd8P29595 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Nedd8P29595 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nedd8P29595 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Nedd8P29595 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nedd8P29595 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nedd8P29595 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nedd8P29595 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nedd8P29595 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nedd8P29595 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.42□□□□□ -0.1
Nedd8P29595 Gm7638-201ENSMUST00000121348 967 ntBASIC14.42□□□□□ -0.1
Nedd8P29595 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms