Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tp53P02340 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tp53P02340 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tp53P02340 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tp53P02340 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.81■□□□□ 0.28
Tp53P02340 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tp53P02340 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tp53P02340 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Tp53P02340 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.8■□□□□ 0.28
Tp53P02340 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Tp53P02340 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.8■□□□□ 0.28
Tp53P02340 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.8■□□□□ 0.28
Tp53P02340 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Tp53P02340 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.8■□□□□ 0.28
Tp53P02340 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Tp53P02340 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tp53P02340 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tp53P02340 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tp53P02340 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tp53P02340 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.79■□□□□ 0.28
Tp53P02340 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Gm25990-201ENSMUST00000102440 86 ntBASIC16.79■□□□□ 0.28
Tp53P02340 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Tp53P02340 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.79■□□□□ 0.28
Tp53P02340 Mir8098-201ENSMUST00000184011 137 ntBASIC16.79■□□□□ 0.28
Tp53P02340 Gm5864-201ENSMUST00000202263 970 ntBASIC16.79■□□□□ 0.28
Tp53P02340 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Tp53P02340 BC037039-201ENSMUST00000192003 2205 ntBASIC16.79■□□□□ 0.28
Tp53P02340 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.79■□□□□ 0.28
Tp53P02340 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.79■□□□□ 0.28
Tp53P02340 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tp53P02340 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tp53P02340 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Tp53P02340 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Tp53P02340 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.78■□□□□ 0.28
Tp53P02340 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.78■□□□□ 0.28
Tp53P02340 Gm6089-201ENSMUST00000197666 938 ntBASIC16.78■□□□□ 0.28
Tp53P02340 Gm43514-201ENSMUST00000198852 424 ntBASIC16.78■□□□□ 0.28
Tp53P02340 Gm6443-201ENSMUST00000203599 874 ntBASIC16.78■□□□□ 0.28
Tp53P02340 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.78■□□□□ 0.28
Tp53P02340 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tp53P02340 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.77■□□□□ 0.28
Tp53P02340 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tp53P02340 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tp53P02340 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tp53P02340 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tp53P02340 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tp53P02340 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tp53P02340 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tp53P02340 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Tp53P02340 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.77■□□□□ 0.28
Tp53P02340 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tp53P02340 Rps4l-201ENSMUST00000071745 943 ntBASIC16.77■□□□□ 0.28
Tp53P02340 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms