Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.9■□□□□ 0.78
TIMP1P01033 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TIMP1P01033 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.89■□□□□ 0.77
TIMP1P01033 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.89■□□□□ 0.77
TIMP1P01033 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TIMP1P01033 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TIMP1P01033 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.89■□□□□ 0.77
TIMP1P01033 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TIMP1P01033 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.89■□□□□ 0.77
TIMP1P01033 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.89■□□□□ 0.77
TIMP1P01033 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.89■□□□□ 0.77
TIMP1P01033 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.89■□□□□ 0.77
TIMP1P01033 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
TIMP1P01033 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TIMP1P01033 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 AL139288.1-201ENST00000623748 933 ntBASIC19.89■□□□□ 0.77
TIMP1P01033 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TIMP1P01033 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.88■□□□□ 0.77
TIMP1P01033 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.88■□□□□ 0.77
TIMP1P01033 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 AC141586.3-201ENST00000562166 1838 ntBASIC19.88■□□□□ 0.77
TIMP1P01033 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TIMP1P01033 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.88■□□□□ 0.77
TIMP1P01033 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.88■□□□□ 0.77
TIMP1P01033 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.88■□□□□ 0.77
TIMP1P01033 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.88■□□□□ 0.77
TIMP1P01033 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.88■□□□□ 0.77
TIMP1P01033 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TIMP1P01033 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.88■□□□□ 0.77
TIMP1P01033 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.88■□□□□ 0.77
TIMP1P01033 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TIMP1P01033 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TIMP1P01033 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.88■□□□□ 0.77
TIMP1P01033 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.88■□□□□ 0.77
TIMP1P01033 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.88■□□□□ 0.77
TIMP1P01033 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TIMP1P01033 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.87■□□□□ 0.77
TIMP1P01033 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.87■□□□□ 0.77
TIMP1P01033 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 DNAJB3-202ENST00000449667 1266 ntBASIC19.87■□□□□ 0.77
TIMP1P01033 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.87■□□□□ 0.77
TIMP1P01033 AC002347.1-201ENST00000569543 541 ntBASIC19.87■□□□□ 0.77
TIMP1P01033 AC107918.4-202ENST00000641623 219 ntBASIC19.87■□□□□ 0.77
TIMP1P01033 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.87■□□□□ 0.77
TIMP1P01033 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TIMP1P01033 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.87■□□□□ 0.77
TIMP1P01033 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TIMP1P01033 MTMR9LP-203ENST00000426597 1545 ntBASIC19.86■□□□□ 0.77
TIMP1P01033 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TIMP1P01033 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TIMP1P01033 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TIMP1P01033 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TIMP1P01033 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TIMP1P01033 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TIMP1P01033 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TIMP1P01033 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.86■□□□□ 0.77
TIMP1P01033 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.86■□□□□ 0.77
TIMP1P01033 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.86■□□□□ 0.77
TIMP1P01033 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.86■□□□□ 0.77
TIMP1P01033 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.86■□□□□ 0.77
TIMP1P01033 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TIMP1P01033 MTDHP4-201ENST00000600287 670 ntBASIC19.86■□□□□ 0.77
TIMP1P01033 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.86■□□□□ 0.77
TIMP1P01033 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.86■□□□□ 0.77
TIMP1P01033 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TIMP1P01033 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TIMP1P01033 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TIMP1P01033 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TIMP1P01033 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TIMP1P01033 AL137060.1-201ENST00000618151 2648 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms