Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.32□□□□□ -0.44
Pde6dO55057 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Pde6dO55057 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pde6dO55057 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pde6dO55057 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pde6dO55057 Rubie-203ENSMUST00000227803 2430 ntBASIC12.31□□□□□ -0.44
Pde6dO55057 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pde6dO55057 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.31□□□□□ -0.44
Pde6dO55057 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.31□□□□□ -0.44
Pde6dO55057 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pde6dO55057 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pde6dO55057 Gm43183-201ENSMUST00000200632 547 ntBASIC12.31□□□□□ -0.44
Pde6dO55057 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.31□□□□□ -0.44
Pde6dO55057 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.31□□□□□ -0.44
Pde6dO55057 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pde6dO55057 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pde6dO55057 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pde6dO55057 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.31□□□□□ -0.44
Pde6dO55057 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pde6dO55057 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.3□□□□□ -0.44
Pde6dO55057 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pde6dO55057 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.3□□□□□ -0.44
Pde6dO55057 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.3□□□□□ -0.44
Pde6dO55057 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.3□□□□□ -0.44
Pde6dO55057 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.3□□□□□ -0.44
Pde6dO55057 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.3□□□□□ -0.44
Pde6dO55057 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Pde6dO55057 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pde6dO55057 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pde6dO55057 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pde6dO55057 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pde6dO55057 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pde6dO55057 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pde6dO55057 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Pde6dO55057 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.29□□□□□ -0.44
Pde6dO55057 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Pde6dO55057 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pde6dO55057 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.29□□□□□ -0.44
Pde6dO55057 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.29□□□□□ -0.44
Pde6dO55057 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.29□□□□□ -0.44
Pde6dO55057 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pde6dO55057 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pde6dO55057 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms