Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Capn1O35350 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Capn1O35350 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Capn1O35350 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Capn1O35350 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Capn1O35350 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.41□□□□□ -0.1
Capn1O35350 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Capn1O35350 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Capn1O35350 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.41□□□□□ -0.1
Capn1O35350 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.41□□□□□ -0.1
Capn1O35350 Gm25406-201ENSMUST00000157599 105 ntBASIC14.41□□□□□ -0.1
Capn1O35350 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.41□□□□□ -0.1
Capn1O35350 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Capn1O35350 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.41□□□□□ -0.1
Capn1O35350 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.41□□□□□ -0.1
Capn1O35350 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Capn1O35350 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.41□□□□□ -0.1
Capn1O35350 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Capn1O35350 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.41□□□□□ -0.1
Capn1O35350 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Capn1O35350 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Capn1O35350 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.4□□□□□ -0.1
Capn1O35350 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Capn1O35350 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Gm8097-201ENSMUST00000117903 829 ntBASIC14.4□□□□□ -0.1
Capn1O35350 Gm11780-201ENSMUST00000136880 516 ntBASIC14.4□□□□□ -0.1
Capn1O35350 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.4□□□□□ -0.1
Capn1O35350 Gm9172-201ENSMUST00000212092 954 ntBASIC14.4□□□□□ -0.1
Capn1O35350 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.4□□□□□ -0.1
Capn1O35350 Gm5364-201ENSMUST00000216789 889 ntBASIC14.4□□□□□ -0.1
Capn1O35350 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.4□□□□□ -0.1
Capn1O35350 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.4□□□□□ -0.1
Capn1O35350 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Capn1O35350 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Capn1O35350 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Capn1O35350 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Capn1O35350 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.39□□□□□ -0.11
Capn1O35350 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Capn1O35350 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.39□□□□□ -0.11
Capn1O35350 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.39□□□□□ -0.11
Capn1O35350 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.39□□□□□ -0.11
Capn1O35350 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.39□□□□□ -0.11
Capn1O35350 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.39□□□□□ -0.11
Capn1O35350 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Gm6089-201ENSMUST00000197666 938 ntBASIC14.39□□□□□ -0.11
Capn1O35350 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.39□□□□□ -0.11
Capn1O35350 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Capn1O35350 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms