Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Gm12497-201ENSMUST00000138778 237 ntBASIC14.08□□□□□ -0.16
Gm3543D3Z235 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3543D3Z235 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.07□□□□□ -0.16
Gm3543D3Z235 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.07□□□□□ -0.16
Gm3543D3Z235 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Gm3543D3Z235 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Mir6404-201ENSMUST00000183699 94 ntBASIC14.07□□□□□ -0.16
Gm3543D3Z235 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Gm7506-201ENSMUST00000207758 815 ntBASIC14.07□□□□□ -0.16
Gm3543D3Z235 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm3543D3Z235 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.07□□□□□ -0.16
Gm3543D3Z235 Gm6296-201ENSMUST00000222599 943 ntBASIC14.07□□□□□ -0.16
Gm3543D3Z235 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3543D3Z235 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.06□□□□□ -0.16
Gm3543D3Z235 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Gm7862-201ENSMUST00000121461 292 ntBASIC14.06□□□□□ -0.16
Gm3543D3Z235 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Gm25406-201ENSMUST00000157599 105 ntBASIC14.06□□□□□ -0.16
Gm3543D3Z235 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.06□□□□□ -0.16
Gm3543D3Z235 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3543D3Z235 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3543D3Z235 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3543D3Z235 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3543D3Z235 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3543D3Z235 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3543D3Z235 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3543D3Z235 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3543D3Z235 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Gm3543D3Z235 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3543D3Z235 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3543D3Z235 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3543D3Z235 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms