Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Mir1897-201ENSMUST00000122581 272 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm9522-201ENSMUST00000182394 926 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm6091-201ENSMUST00000098307 165 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm7556-201ENSMUST00000201178 1084 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm43275-201ENSMUST00000202053 1020 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Dupd1-202ENSMUST00000224735 548 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm14130-201ENSMUST00000118417 987 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm16026-204ENSMUST00000162652 683 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm29127-201ENSMUST00000188304 517 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Arhgef33-210ENSMUST00000225548 456 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm27514-201ENSMUST00000183692 110 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm27516-201ENSMUST00000184237 98 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 AC122876.1-201ENSMUST00000217619 825 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 AC158538.2-201ENSMUST00000225455 906 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 AL645783.1-201ENSMUST00000221416 1832 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm12816-201ENSMUST00000118069 1212 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm12201-201ENSMUST00000120657 1234 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm9823-201ENSMUST00000051212 327 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm5879-201ENSMUST00000089501 1209 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm18054-201ENSMUST00000207539 555 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 AC122459.1-201ENSMUST00000228373 885 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ubr4A2AN08 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC8.09□□□□□ -1.11
Ubr4A2AN08 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Ubr4A2AN08 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Ubr4A2AN08 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Ubr4A2AN08 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Ubr4A2AN08 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Ubr4A2AN08 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC8.09□□□□□ -1.12
Ubr4A2AN08 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
Ubr4A2AN08 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms