Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ccdc112A0AUP1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc112A0AUP1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc112A0AUP1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc112A0AUP1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc112A0AUP1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc112A0AUP1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc112A0AUP1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc112A0AUP1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc112A0AUP1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc112A0AUP1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ccdc112A0AUP1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc112A0AUP1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms