Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Gm13616-201ENSMUST00000120600 222 ntBASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Rpph1-201ENSMUST00000175096 319 ntBASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Mir6956-201ENSMUST00000183598 62 ntBASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28729A0A1B0GSW2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm28729A0A1B0GSW2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm28729A0A1B0GSW2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Gm14722-201ENSMUST00000118943 689 ntBASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Gm5312-201ENSMUST00000203728 547 ntBASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28729A0A1B0GSW2 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms