Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm37722-201ENSMUST00000193757 208 ntBASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm45058-201ENSMUST00000205810 766 ntBASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm18959-201ENSMUST00000208954 655 ntBASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Mir6404-201ENSMUST00000183699 94 ntBASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm13559-201ENSMUST00000120476 863 ntBASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm27011-201ENSMUST00000182352 972 ntBASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms