Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clip2Q9Z0H8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clip2Q9Z0H8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clip2Q9Z0H8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.09■□□□□ 0.49
Clip2Q9Z0H8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clip2Q9Z0H8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.08■□□□□ 0.49
Clip2Q9Z0H8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Clip2Q9Z0H8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clip2Q9Z0H8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Clip2Q9Z0H8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clip2Q9Z0H8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clip2Q9Z0H8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Clip2Q9Z0H8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clip2Q9Z0H8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clip2Q9Z0H8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.08■□□□□ 0.48
Clip2Q9Z0H8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.08■□□□□ 0.48
Clip2Q9Z0H8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.08■□□□□ 0.48
Clip2Q9Z0H8 Gm18489-201ENSMUST00000172565 551 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms