Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Gm12813-201ENSMUST00000119615 902 ntBASIC13.68□□□□□ -0.22
Nubp1Q9R060 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC13.68□□□□□ -0.22
Nubp1Q9R060 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.68□□□□□ -0.22
Nubp1Q9R060 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.68□□□□□ -0.22
Nubp1Q9R060 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.67□□□□□ -0.22
Nubp1Q9R060 Gm18719-201ENSMUST00000196696 1413 ntBASIC13.67□□□□□ -0.22
Nubp1Q9R060 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.67□□□□□ -0.22
Nubp1Q9R060 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Gm5312-201ENSMUST00000203728 547 ntBASIC13.67□□□□□ -0.22
Nubp1Q9R060 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC13.67□□□□□ -0.22
Nubp1Q9R060 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.67□□□□□ -0.22
Nubp1Q9R060 CT009495.1-201ENSMUST00000224221 862 ntBASIC13.67□□□□□ -0.22
Nubp1Q9R060 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nubp1Q9R060 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nubp1Q9R060 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.66□□□□□ -0.22
Nubp1Q9R060 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Gm37153-201ENSMUST00000193637 231 ntBASIC13.66□□□□□ -0.22
Nubp1Q9R060 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms