Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mbd3l1Q9D9H3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Reep4-203ENSMUST00000226563 1444 ntBASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mbd3l1Q9D9H3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Mir7075-201ENSMUST00000184187 82 ntBASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mbd3l1Q9D9H3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Gm26833-201ENSMUST00000180899 440 ntBASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Gm8493-201ENSMUST00000196881 489 ntBASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms