Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Gm7889-201ENSMUST00000185591 958 ntBASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sh2d4aQ9D7V1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2d4aQ9D7V1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Gm37722-201ENSMUST00000193757 208 ntBASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Gm18959-201ENSMUST00000208954 655 ntBASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms