Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift27Q9D0P8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Ift27Q9D0P8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift27Q9D0P8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.27□□□□□ -0.12
Ift27Q9D0P8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ift27Q9D0P8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift27Q9D0P8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift27Q9D0P8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ift27Q9D0P8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift27Q9D0P8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift27Q9D0P8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Gm20049-201ENSMUST00000219950 730 ntBASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.26□□□□□ -0.13
Ift27Q9D0P8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ift27Q9D0P8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Gm37179-201ENSMUST00000194862 823 ntBASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift27Q9D0P8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms