Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ska1Q9CPV1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.76□□□□□ -0.05
Ska1Q9CPV1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ska1Q9CPV1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ska1Q9CPV1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ska1Q9CPV1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ska1Q9CPV1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ska1Q9CPV1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ska1Q9CPV1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ska1Q9CPV1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Gm10013-201ENSMUST00000106074 672 ntBASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Gm37722-201ENSMUST00000193757 208 ntBASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Ska1Q9CPV1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Gm18032-201ENSMUST00000222541 538 ntBASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska1Q9CPV1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms