Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Gm27646-201ENSMUST00000183989 110 ntBASIC13.64□□□□□ -0.23
Scrt1Q99M85 Gm27321-201ENSMUST00000185021 205 ntBASIC13.64□□□□□ -0.23
Scrt1Q99M85 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.64□□□□□ -0.23
Scrt1Q99M85 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scrt1Q99M85 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Scrt1Q99M85 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.63□□□□□ -0.23
Scrt1Q99M85 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Mir6956-201ENSMUST00000183598 62 ntBASIC13.63□□□□□ -0.23
Scrt1Q99M85 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Gm9172-201ENSMUST00000212092 954 ntBASIC13.63□□□□□ -0.23
Scrt1Q99M85 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scrt1Q99M85 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms