Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.81■□□□□ 0.44
Trex1Q91XB0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.81■□□□□ 0.44
Trex1Q91XB0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Gm14722-201ENSMUST00000118943 689 ntBASIC17.81■□□□□ 0.44
Trex1Q91XB0 Gm20553-201ENSMUST00000204205 844 ntBASIC17.81■□□□□ 0.44
Trex1Q91XB0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.8■□□□□ 0.44
Trex1Q91XB0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.8■□□□□ 0.44
Trex1Q91XB0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Gm12008-201ENSMUST00000117791 755 ntBASIC17.8■□□□□ 0.44
Trex1Q91XB0 Gm15920-201ENSMUST00000118998 402 ntBASIC17.8■□□□□ 0.44
Trex1Q91XB0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.8■□□□□ 0.44
Trex1Q91XB0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.8■□□□□ 0.44
Trex1Q91XB0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trex1Q91XB0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Gm11745-201ENSMUST00000121669 448 ntBASIC17.79■□□□□ 0.44
Trex1Q91XB0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Gm10499-201ENSMUST00000174094 934 ntBASIC17.79■□□□□ 0.44
Trex1Q91XB0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.79■□□□□ 0.44
Trex1Q91XB0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.79■□□□□ 0.44
Trex1Q91XB0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.78■□□□□ 0.44
Trex1Q91XB0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Gm9385-201ENSMUST00000117563 472 ntBASIC17.78■□□□□ 0.44
Trex1Q91XB0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Gm44335-201ENSMUST00000196879 141 ntBASIC17.78■□□□□ 0.44
Trex1Q91XB0 Gm44297-201ENSMUST00000198304 141 ntBASIC17.78■□□□□ 0.44
Trex1Q91XB0 Gm44346-201ENSMUST00000198851 141 ntBASIC17.78■□□□□ 0.44
Trex1Q91XB0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trex1Q91XB0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms