Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Ndc1Q8VCB1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ndc1Q8VCB1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Ndc1Q8VCB1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ndc1Q8VCB1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ndc1Q8VCB1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.71□□□□□ -0.06
Ndc1Q8VCB1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.71□□□□□ -0.06
Ndc1Q8VCB1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ndc1Q8VCB1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ndc1Q8VCB1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ndc1Q8VCB1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Psmb5-202ENSMUST00000227257 622 ntBASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Gm5867-201ENSMUST00000063197 592 ntBASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ndc1Q8VCB1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Gm13036-201ENSMUST00000117799 748 ntBASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Gm8000-201ENSMUST00000188378 592 ntBASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms