Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim68Q8K243 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim68Q8K243 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.91■□□□□ 0.3
Trim68Q8K243 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim68Q8K243 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.91■□□□□ 0.3
Trim68Q8K243 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim68Q8K243 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim68Q8K243 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim68Q8K243 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.9■□□□□ 0.3
Trim68Q8K243 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim68Q8K243 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim68Q8K243 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 Gm15920-201ENSMUST00000118998 402 ntBASIC16.9■□□□□ 0.3
Trim68Q8K243 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim68Q8K243 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim68Q8K243 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim68Q8K243 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Trim68Q8K243 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim68Q8K243 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim68Q8K243 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim68Q8K243 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim68Q8K243 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
Trim68Q8K243 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trim68Q8K243 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.89■□□□□ 0.3
Trim68Q8K243 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim68Q8K243 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Trim68Q8K243 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim68Q8K243 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.89■□□□□ 0.29
Trim68Q8K243 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim68Q8K243 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim68Q8K243 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.88■□□□□ 0.29
Trim68Q8K243 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Trim68Q8K243 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim68Q8K243 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim68Q8K243 Gm14701-201ENSMUST00000117156 348 ntBASIC16.88■□□□□ 0.29
Trim68Q8K243 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Mir8117-201ENSMUST00000184773 107 ntBASIC16.88■□□□□ 0.29
Trim68Q8K243 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim68Q8K243 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.88■□□□□ 0.29
Trim68Q8K243 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim68Q8K243 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Trim68Q8K243 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Trim68Q8K243 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim68Q8K243 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms