Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfcQ8CI19 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Gm10499-201ENSMUST00000174094 934 ntBASIC17.11■□□□□ 0.33
PdgfcQ8CI19 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfcQ8CI19 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfcQ8CI19 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.09■□□□□ 0.33
PdgfcQ8CI19 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.09■□□□□ 0.33
PdgfcQ8CI19 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.09■□□□□ 0.33
PdgfcQ8CI19 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfcQ8CI19 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfcQ8CI19 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfcQ8CI19 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfcQ8CI19 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfcQ8CI19 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfcQ8CI19 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms