Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm23547-201ENSMUST00000158210 271 ntBASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm7417-201ENSMUST00000192950 473 ntBASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.85□□□□□ -0.51
Hist3h2bbQ8CGP0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hist3h2bbQ8CGP0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms