Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gm8825-201ENSMUST00000182565 998 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gm4518-201ENSMUST00000182638 718 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.88■□□□□ 0.45
Smc2Q8CG48 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.88■□□□□ 0.45
Smc2Q8CG48 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc2Q8CG48 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.87■□□□□ 0.45
Smc2Q8CG48 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smc2Q8CG48 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Gm14859-201ENSMUST00000117752 357 ntBASIC17.86■□□□□ 0.45
Smc2Q8CG48 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.86■□□□□ 0.45
Smc2Q8CG48 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc2Q8CG48 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Gm15165-201ENSMUST00000118140 502 ntBASIC17.85■□□□□ 0.45
Smc2Q8CG48 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Smc2Q8CG48 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.85■□□□□ 0.45
Smc2Q8CG48 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.85■□□□□ 0.45
Smc2Q8CG48 Sybu-209ENSMUST00000228639 4113 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms