Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap1Q8BTW8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm2213-201ENSMUST00000197485 688 ntBASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm9682-201ENSMUST00000197505 556 ntBASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap1Q8BTW8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap1Q8BTW8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cdk5rap1Q8BTW8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cdk5rap1Q8BTW8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap1Q8BTW8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cdk5rap1Q8BTW8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap1Q8BTW8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap1Q8BTW8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap1Q8BTW8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap1Q8BTW8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap1Q8BTW8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap1Q8BTW8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Gm11594-201ENSMUST00000122313 162 ntBASIC14.76□□□□□ -0.05
Cdk5rap1Q8BTW8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms