Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc116Q80X53 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm25745-201ENSMUST00000174945 133 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm8825-201ENSMUST00000182565 998 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm4518-201ENSMUST00000182638 718 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc116Q80X53 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc116Q80X53 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc116Q80X53 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc116Q80X53 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms