Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.37□□□□□ -0.11
Pif1Q80SX8 Gm27300-201ENSMUST00000184085 97 ntBASIC14.37□□□□□ -0.11
Pif1Q80SX8 Gm27335-201ENSMUST00000184758 97 ntBASIC14.37□□□□□ -0.11
Pif1Q80SX8 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.37□□□□□ -0.11
Pif1Q80SX8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.37□□□□□ -0.11
Pif1Q80SX8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.37□□□□□ -0.11
Pif1Q80SX8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pif1Q80SX8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Gm15358-201ENSMUST00000119249 520 ntBASIC14.36□□□□□ -0.11
Pif1Q80SX8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pif1Q80SX8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Gm10576-201ENSMUST00000191927 825 ntBASIC14.35□□□□□ -0.11
Pif1Q80SX8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Gm7787-201ENSMUST00000216858 688 ntBASIC14.35□□□□□ -0.11
Pif1Q80SX8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.35□□□□□ -0.11
Pif1Q80SX8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms