Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf220Q6PDX6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf220Q6PDX6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf220Q6PDX6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf220Q6PDX6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rnf220Q6PDX6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Rnf220Q6PDX6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Gm7638-201ENSMUST00000121348 967 ntBASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Gm12134-201ENSMUST00000122109 520 ntBASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Gm20760-201ENSMUST00000179197 648 ntBASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf220Q6PDX6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Rnf220Q6PDX6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf220Q6PDX6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms