Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.72■□□□□ 0.27
ShbQ6PD21 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.72■□□□□ 0.27
ShbQ6PD21 Gm18062-201ENSMUST00000208020 547 ntBASIC16.72■□□□□ 0.27
ShbQ6PD21 Gm18055-201ENSMUST00000208254 547 ntBASIC16.72■□□□□ 0.27
ShbQ6PD21 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.72■□□□□ 0.27
ShbQ6PD21 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ShbQ6PD21 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShbQ6PD21 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShbQ6PD21 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShbQ6PD21 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.71■□□□□ 0.27
ShbQ6PD21 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.71■□□□□ 0.27
ShbQ6PD21 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.71■□□□□ 0.27
ShbQ6PD21 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShbQ6PD21 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.71■□□□□ 0.27
ShbQ6PD21 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShbQ6PD21 Gm13829-201ENSMUST00000119600 138 ntBASIC16.71■□□□□ 0.27
ShbQ6PD21 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ShbQ6PD21 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ShbQ6PD21 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ShbQ6PD21 Gm9908-201ENSMUST00000211534 448 ntBASIC16.71■□□□□ 0.27
ShbQ6PD21 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.71■□□□□ 0.27
ShbQ6PD21 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.71■□□□□ 0.27
ShbQ6PD21 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShbQ6PD21 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ShbQ6PD21 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShbQ6PD21 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShbQ6PD21 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShbQ6PD21 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ShbQ6PD21 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.71■□□□□ 0.27
ShbQ6PD21 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.71■□□□□ 0.27
ShbQ6PD21 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.71■□□□□ 0.27
ShbQ6PD21 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ShbQ6PD21 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ShbQ6PD21 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ShbQ6PD21 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ShbQ6PD21 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Gm14042-201ENSMUST00000120139 833 ntBASIC16.7■□□□□ 0.26
ShbQ6PD21 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ShbQ6PD21 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Gm8602-201ENSMUST00000184045 607 ntBASIC16.7■□□□□ 0.26
ShbQ6PD21 Gm18018-201ENSMUST00000198273 408 ntBASIC16.7■□□□□ 0.26
ShbQ6PD21 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.7■□□□□ 0.26
ShbQ6PD21 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.7■□□□□ 0.26
ShbQ6PD21 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.7■□□□□ 0.26
ShbQ6PD21 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ShbQ6PD21 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ShbQ6PD21 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
ShbQ6PD21 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
ShbQ6PD21 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.69■□□□□ 0.26
ShbQ6PD21 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.69■□□□□ 0.26
ShbQ6PD21 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.69■□□□□ 0.26
ShbQ6PD21 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Shd-206ENSMUST00000225145 998 ntBASIC16.69■□□□□ 0.26
ShbQ6PD21 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ShbQ6PD21 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.69■□□□□ 0.26
ShbQ6PD21 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.69■□□□□ 0.26
ShbQ6PD21 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ShbQ6PD21 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ShbQ6PD21 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShbQ6PD21 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShbQ6PD21 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShbQ6PD21 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShbQ6PD21 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShbQ6PD21 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShbQ6PD21 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShbQ6PD21 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ShbQ6PD21 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.68■□□□□ 0.26
ShbQ6PD21 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ShbQ6PD21 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ShbQ6PD21 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms