Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.61■□□□□ 0.25
Six2Q62232 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Six2Q62232 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Six2Q62232 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.61■□□□□ 0.25
Six2Q62232 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.61■□□□□ 0.25
Six2Q62232 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Six2Q62232 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Six2Q62232 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Six2Q62232 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Six2Q62232 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.6■□□□□ 0.25
Six2Q62232 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.6■□□□□ 0.25
Six2Q62232 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Six2Q62232 Gm21362-201ENSMUST00000194272 928 ntBASIC16.6■□□□□ 0.25
Six2Q62232 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Six2Q62232 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.6■□□□□ 0.25
Six2Q62232 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Six2Q62232 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Six2Q62232 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Six2Q62232 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.59■□□□□ 0.25
Six2Q62232 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.59■□□□□ 0.25
Six2Q62232 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.59■□□□□ 0.25
Six2Q62232 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.59■□□□□ 0.25
Six2Q62232 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Six2Q62232 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Six2Q62232 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Six2Q62232 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.59■□□□□ 0.25
Six2Q62232 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six2Q62232 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six2Q62232 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six2Q62232 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six2Q62232 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Six2Q62232 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six2Q62232 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Six2Q62232 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Six2Q62232 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.58■□□□□ 0.24
Six2Q62232 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Six2Q62232 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.58■□□□□ 0.24
Six2Q62232 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Six2Q62232 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six2Q62232 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six2Q62232 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms