Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm22175-201ENSMUST00000175007 78 ntBASIC17.03■□□□□ 0.32
Cln3Q61124 Gm2272-201ENSMUST00000194903 582 ntBASIC17.03■□□□□ 0.32
Cln3Q61124 Gm18057-201ENSMUST00000208220 503 ntBASIC17.03■□□□□ 0.32
Cln3Q61124 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.03■□□□□ 0.32
Cln3Q61124 Gm10154-201ENSMUST00000084445 354 ntBASIC17.03■□□□□ 0.32
Cln3Q61124 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.03■□□□□ 0.32
Cln3Q61124 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cln3Q61124 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.02■□□□□ 0.32
Cln3Q61124 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cln3Q61124 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cln3Q61124 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cln3Q61124 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln3Q61124 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln3Q61124 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cln3Q61124 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.02■□□□□ 0.32
Cln3Q61124 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cln3Q61124 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln3Q61124 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln3Q61124 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cln3Q61124 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln3Q61124 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.02■□□□□ 0.32
Cln3Q61124 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.02■□□□□ 0.32
Cln3Q61124 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
Cln3Q61124 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.02■□□□□ 0.32
Cln3Q61124 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln3Q61124 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cln3Q61124 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln3Q61124 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cln3Q61124 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.02■□□□□ 0.31
Cln3Q61124 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cln3Q61124 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cln3Q61124 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cln3Q61124 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.02■□□□□ 0.31
Cln3Q61124 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cln3Q61124 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.01■□□□□ 0.31
Cln3Q61124 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.01■□□□□ 0.31
Cln3Q61124 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cln3Q61124 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.01■□□□□ 0.31
Cln3Q61124 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.01■□□□□ 0.31
Cln3Q61124 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.01■□□□□ 0.31
Cln3Q61124 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.01■□□□□ 0.31
Cln3Q61124 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln3Q61124 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Cln3Q61124 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.01■□□□□ 0.31
Cln3Q61124 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln3Q61124 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cln3Q61124 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17■□□□□ 0.31
Cln3Q61124 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln3Q61124 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln3Q61124 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cln3Q61124 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cln3Q61124 Gm22065-201ENSMUST00000103753 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm22066-201ENSMUST00000103761 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm24932-201ENSMUST00000103763 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm24115-201ENSMUST00000103799 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm22190-201ENSMUST00000103827 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm22191-201ENSMUST00000103831 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm24721-201ENSMUST00000103849 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm28018-201ENSMUST00000103869 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm26399-201ENSMUST00000103937 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln3Q61124 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cln3Q61124 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cln3Q61124 Gm25349-201ENSMUST00000177728 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm23616-201ENSMUST00000177797 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm25871-201ENSMUST00000177816 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm24752-201ENSMUST00000178240 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm24496-201ENSMUST00000178287 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm25649-201ENSMUST00000178476 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm25548-201ENSMUST00000178681 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm23147-201ENSMUST00000178841 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm26095-201ENSMUST00000179270 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm22171-201ENSMUST00000179283 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm23936-201ENSMUST00000179354 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm22619-201ENSMUST00000179516 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm25255-201ENSMUST00000179579 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm24755-201ENSMUST00000179691 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm26506-201ENSMUST00000179692 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm25086-201ENSMUST00000179931 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm23243-201ENSMUST00000180047 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm24659-201ENSMUST00000180212 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm24169-201ENSMUST00000180244 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm23689-201ENSMUST00000180354 110 ntBASIC17■□□□□ 0.31
Cln3Q61124 Gm27359-201ENSMUST00000184153 110 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms