Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Gm15920-201ENSMUST00000118998 402 ntBASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Mir1895-201ENSMUST00000122615 79 ntBASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Gm10576-201ENSMUST00000191927 825 ntBASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Gm17968-201ENSMUST00000194902 784 ntBASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6-2Q5R1I4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Gm13597-201ENSMUST00000121239 375 ntBASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Gm27494-201ENSMUST00000184735 189 ntBASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-2Q5R1I4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Gm18246-201ENSMUST00000221023 728 ntBASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6-2Q5R1I4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6-2Q5R1I4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms