Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Gm37153-201ENSMUST00000193637 231 ntBASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Psmb5-202ENSMUST00000227257 622 ntBASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-4Q5R1I0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6d-4Q5R1I0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-4Q5R1I0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Gm27525-201ENSMUST00000184465 107 ntBASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-4Q5R1I0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms