Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8d-1Q5R1H8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Gm10231-201ENSMUST00000181584 441 ntBASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Gm10175-202ENSMUST00000208752 441 ntBASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8d-1Q5R1H8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8d-1Q5R1H8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Gm22697-201ENSMUST00000175194 63 ntBASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Mir1668-201ENSMUST00000184114 107 ntBASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8d-1Q5R1H8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms