Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm1Q52KI8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm1Q52KI8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm1Q52KI8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Gm11424-201ENSMUST00000121929 829 ntBASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Gm27622-201ENSMUST00000183779 60 ntBASIC17.44■□□□□ 0.38
Srrm1Q52KI8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Thap2-203ENSMUST00000218989 527 ntBASIC17.44■□□□□ 0.38
Srrm1Q52KI8 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srrm1Q52KI8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Gm18246-201ENSMUST00000221023 728 ntBASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm1Q52KI8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.42■□□□□ 0.38
Srrm1Q52KI8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm1Q52KI8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms