Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.29□□□□□ -0.12
Scn1bP97952 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.29□□□□□ -0.12
Scn1bP97952 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scn1bP97952 Mir1199-201ENSMUST00000117015 119 ntBASIC14.29□□□□□ -0.12
Scn1bP97952 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scn1bP97952 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.29□□□□□ -0.12
Scn1bP97952 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.29□□□□□ -0.12
Scn1bP97952 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Scn1bP97952 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.29□□□□□ -0.12
Scn1bP97952 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Scn1bP97952 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Scn1bP97952 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.29□□□□□ -0.12
Scn1bP97952 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scn1bP97952 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1bP97952 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn1bP97952 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn1bP97952 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn1bP97952 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.28□□□□□ -0.12
Scn1bP97952 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn1bP97952 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn1bP97952 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Scn1bP97952 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Scn1bP97952 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn1bP97952 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Scn1bP97952 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1bP97952 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Scn1bP97952 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.27□□□□□ -0.12
Scn1bP97952 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Scn1bP97952 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Scn1bP97952 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.27□□□□□ -0.12
Scn1bP97952 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Scn1bP97952 Actl10-202ENSMUST00000226583 1501 ntBASIC14.27□□□□□ -0.12
Scn1bP97952 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Scn1bP97952 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1bP97952 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1bP97952 Gm12134-201ENSMUST00000122109 520 ntBASIC14.27□□□□□ -0.13
Scn1bP97952 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1bP97952 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1bP97952 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1bP97952 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.27□□□□□ -0.13
Scn1bP97952 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1bP97952 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1bP97952 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1bP97952 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1bP97952 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1bP97952 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1bP97952 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.26□□□□□ -0.13
Scn1bP97952 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1bP97952 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms