Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.54□□□□□ -0.72
PrkdcP97313 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
PrkdcP97313 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.54□□□□□ -0.72
PrkdcP97313 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.54□□□□□ -0.72
PrkdcP97313 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
PrkdcP97313 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PrkdcP97313 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Gm14660-201ENSMUST00000119809 575 ntBASIC10.53□□□□□ -0.72
PrkdcP97313 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Gm11543-201ENSMUST00000120758 370 ntBASIC10.53□□□□□ -0.72
PrkdcP97313 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC10.53□□□□□ -0.72
PrkdcP97313 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC10.53□□□□□ -0.72
PrkdcP97313 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Mir1982-201ENSMUST00000157368 74 ntBASIC10.53□□□□□ -0.72
PrkdcP97313 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Gm28760-201ENSMUST00000185995 736 ntBASIC10.53□□□□□ -0.72
PrkdcP97313 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.53□□□□□ -0.72
PrkdcP97313 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
PrkdcP97313 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
PrkdcP97313 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
PrkdcP97313 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
PrkdcP97313 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.52□□□□□ -0.72
PrkdcP97313 Gm17420-201ENSMUST00000164753 153 ntBASIC10.52□□□□□ -0.72
PrkdcP97313 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
PrkdcP97313 Gm27892-201ENSMUST00000185017 106 ntBASIC10.52□□□□□ -0.72
PrkdcP97313 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
PrkdcP97313 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
PrkdcP97313 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
PrkdcP97313 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.52□□□□□ -0.73
PrkdcP97313 Gm12742-201ENSMUST00000117326 410 ntBASIC10.52□□□□□ -0.73
PrkdcP97313 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.52□□□□□ -0.73
PrkdcP97313 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.52□□□□□ -0.73
PrkdcP97313 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.52□□□□□ -0.73
PrkdcP97313 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.52□□□□□ -0.73
PrkdcP97313 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PrkdcP97313 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PrkdcP97313 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PrkdcP97313 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
PrkdcP97313 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PrkdcP97313 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.52□□□□□ -0.73
PrkdcP97313 Gm27920-201ENSMUST00000183953 96 ntBASIC10.52□□□□□ -0.73
PrkdcP97313 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.52□□□□□ -0.73
PrkdcP97313 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.52□□□□□ -0.73
PrkdcP97313 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PrkdcP97313 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PrkdcP97313 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.52□□□□□ -0.73
PrkdcP97313 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PrkdcP97313 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PrkdcP97313 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PrkdcP97313 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PrkdcP97313 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
PrkdcP97313 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PrkdcP97313 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PrkdcP97313 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PrkdcP97313 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PrkdcP97313 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PrkdcP97313 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PrkdcP97313 Gm23931-201ENSMUST00000103842 109 ntBASIC10.51□□□□□ -0.73
PrkdcP97313 Gm3436-201ENSMUST00000179930 840 ntBASIC10.51□□□□□ -0.73
PrkdcP97313 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PrkdcP97313 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PrkdcP97313 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PrkdcP97313 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PrkdcP97313 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
PrkdcP97313 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC10.51□□□□□ -0.73
PrkdcP97313 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms