Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Dancr-204ENSMUST00000132389 2347 ntBASIC14.74□□□□□ -0.05
Nup43P59235 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.74□□□□□ -0.05
Nup43P59235 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.73□□□□□ -0.05
Nup43P59235 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.73□□□□□ -0.05
Nup43P59235 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nup43P59235 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.73□□□□□ -0.05
Nup43P59235 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Gm13884-201ENSMUST00000118103 829 ntBASIC14.73□□□□□ -0.05
Nup43P59235 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nup43P59235 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.73□□□□□ -0.05
Nup43P59235 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.73□□□□□ -0.05
Nup43P59235 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.73□□□□□ -0.05
Nup43P59235 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nup43P59235 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup43P59235 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.72□□□□□ -0.05
Nup43P59235 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.72□□□□□ -0.05
Nup43P59235 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.72□□□□□ -0.05
Nup43P59235 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Nup43P59235 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.72□□□□□ -0.05
Nup43P59235 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup43P59235 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup43P59235 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup43P59235 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup43P59235 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup43P59235 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Nup43P59235 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup43P59235 Gm25990-201ENSMUST00000102440 86 ntBASIC14.71□□□□□ -0.05
Nup43P59235 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.71□□□□□ -0.05
Nup43P59235 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.71□□□□□ -0.05
Nup43P59235 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nup43P59235 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup43P59235 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.71□□□□□ -0.05
Nup43P59235 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup43P59235 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nup43P59235 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nup43P59235 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nup43P59235 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nup43P59235 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nup43P59235 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nup43P59235 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Nup43P59235 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.7□□□□□ -0.06
Nup43P59235 Gm7862-201ENSMUST00000121461 292 ntBASIC14.7□□□□□ -0.06
Nup43P59235 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Nup43P59235 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.7□□□□□ -0.06
Nup43P59235 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.7□□□□□ -0.06
Nup43P59235 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Nup43P59235 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.7□□□□□ -0.06
Nup43P59235 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup43P59235 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Nup43P59235 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nup43P59235 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.69□□□□□ -0.06
Nup43P59235 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms