Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VhlP40338 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VhlP40338 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
VhlP40338 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VhlP40338 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VhlP40338 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.82□□□□□ -0.36
VhlP40338 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
VhlP40338 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.82□□□□□ -0.36
VhlP40338 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
VhlP40338 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
VhlP40338 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
VhlP40338 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VhlP40338 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.82□□□□□ -0.36
VhlP40338 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VhlP40338 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VhlP40338 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.81□□□□□ -0.36
VhlP40338 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.81□□□□□ -0.36
VhlP40338 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.81□□□□□ -0.36
VhlP40338 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
VhlP40338 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.81□□□□□ -0.36
VhlP40338 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
VhlP40338 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
VhlP40338 Gm5417-201ENSMUST00000079706 384 ntBASIC12.81□□□□□ -0.36
VhlP40338 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VhlP40338 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.8□□□□□ -0.36
VhlP40338 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
VhlP40338 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.8□□□□□ -0.36
VhlP40338 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
VhlP40338 Mir7071-201ENSMUST00000184847 69 ntBASIC12.8□□□□□ -0.36
VhlP40338 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.8□□□□□ -0.36
VhlP40338 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.8□□□□□ -0.36
VhlP40338 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VhlP40338 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.8□□□□□ -0.36
VhlP40338 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms