Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.04■□□□□ 0.32
Sox5P35710 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sox5P35710 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Sox5P35710 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sox5P35710 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.03■□□□□ 0.32
Sox5P35710 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.03■□□□□ 0.32
Sox5P35710 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sox5P35710 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sox5P35710 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox5P35710 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox5P35710 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
Sox5P35710 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox5P35710 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox5P35710 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.02■□□□□ 0.32
Sox5P35710 Gm25406-201ENSMUST00000157599 105 ntBASIC17.02■□□□□ 0.32
Sox5P35710 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.02■□□□□ 0.32
Sox5P35710 Mir6982-201ENSMUST00000184354 68 ntBASIC17.02■□□□□ 0.32
Sox5P35710 Gm5587-201ENSMUST00000206270 674 ntBASIC17.02■□□□□ 0.32
Sox5P35710 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.02■□□□□ 0.32
Sox5P35710 Gm10252-201ENSMUST00000209541 832 ntBASIC17.02■□□□□ 0.32
Sox5P35710 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox5P35710 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox5P35710 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox5P35710 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox5P35710 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox5P35710 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox5P35710 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox5P35710 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox5P35710 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox5P35710 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox5P35710 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Sox5P35710 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sox5P35710 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sox5P35710 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox5P35710 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17■□□□□ 0.31
Sox5P35710 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Gm13337-201ENSMUST00000119183 1594 ntBASIC17■□□□□ 0.31
Sox5P35710 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17■□□□□ 0.31
Sox5P35710 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Sox5P35710 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Sox5P35710 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sox5P35710 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox5P35710 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms