Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nedd8P29595 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.48□□□□□ -0.09
Nedd8P29595 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.48□□□□□ -0.09
Nedd8P29595 Gm12134-201ENSMUST00000122109 520 ntBASIC14.48□□□□□ -0.09
Nedd8P29595 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nedd8P29595 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nedd8P29595 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
Nedd8P29595 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Nedd8P29595 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nedd8P29595 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Nedd8P29595 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nedd8P29595 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Nedd8P29595 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.47□□□□□ -0.09
Nedd8P29595 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.47□□□□□ -0.09
Nedd8P29595 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nedd8P29595 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.47□□□□□ -0.09
Nedd8P29595 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.47□□□□□ -0.09
Nedd8P29595 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.47□□□□□ -0.09
Nedd8P29595 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nedd8P29595 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nedd8P29595 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.46□□□□□ -0.09
Nedd8P29595 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.46□□□□□ -0.09
Nedd8P29595 Gm11249-201ENSMUST00000117071 859 ntBASIC14.46□□□□□ -0.09
Nedd8P29595 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.46□□□□□ -0.09
Nedd8P29595 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.46□□□□□ -0.09
Nedd8P29595 Gm36967-201ENSMUST00000193814 266 ntBASIC14.46□□□□□ -0.09
Nedd8P29595 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Nedd8P29595 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nedd8P29595 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nedd8P29595 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Nedd8P29595 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nedd8P29595 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nedd8P29595 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nedd8P29595 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Nedd8P29595 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Nedd8P29595 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.46□□□□□ -0.1
Nedd8P29595 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nedd8P29595 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nedd8P29595 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Nedd8P29595 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nedd8P29595 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.45□□□□□ -0.1
Nedd8P29595 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nedd8P29595 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms