Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RxrbP28704 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RxrbP28704 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.69■□□□□ 0.1
RxrbP28704 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RxrbP28704 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RxrbP28704 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RxrbP28704 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.69■□□□□ 0.1
RxrbP28704 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RxrbP28704 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RxrbP28704 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RxrbP28704 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RxrbP28704 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RxrbP28704 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RxrbP28704 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.68■□□□□ 0.1
RxrbP28704 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RxrbP28704 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.68■□□□□ 0.1
RxrbP28704 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.68■□□□□ 0.1
RxrbP28704 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RxrbP28704 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RxrbP28704 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RxrbP28704 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RxrbP28704 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RxrbP28704 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RxrbP28704 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.67■□□□□ 0.1
RxrbP28704 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RxrbP28704 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.67■□□□□ 0.1
RxrbP28704 Gm27389-201ENSMUST00000183622 195 ntBASIC15.67■□□□□ 0.1
RxrbP28704 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.67■□□□□ 0.1
RxrbP28704 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RxrbP28704 Gm10566-201ENSMUST00000086739 996 ntBASIC15.67■□□□□ 0.1
RxrbP28704 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.67■□□□□ 0.1
RxrbP28704 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RxrbP28704 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.67■□□□□ 0.1
RxrbP28704 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RxrbP28704 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.67■□□□□ 0.1
RxrbP28704 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
RxrbP28704 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RxrbP28704 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
RxrbP28704 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RxrbP28704 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RxrbP28704 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.66■□□□□ 0.1
RxrbP28704 Gm6257-201ENSMUST00000163864 910 ntBASIC15.66■□□□□ 0.1
RxrbP28704 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.66■□□□□ 0.1
RxrbP28704 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.66■□□□□ 0.1
RxrbP28704 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RxrbP28704 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RxrbP28704 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RxrbP28704 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RxrbP28704 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RxrbP28704 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RxrbP28704 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.65■□□□□ 0.1
RxrbP28704 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.65■□□□□ 0.1
RxrbP28704 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RxrbP28704 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RxrbP28704 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms